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Local result
Explore conservative matches separately from records that may match because their RNA contains ambiguous IUPAC bases.
hamming_upper_bound ≤ d, cumulative thresholds 0–6BLAST nominates candidates; IUPAC-aware Hamming performs final classification. Candidate absence is not a guarantee of global BLAST recall.
| Sample | Validation | Source records | After cutoff | sample_total_after_cutoff | Qualified RNA range | IUPAC RNA | Candidates | Guaranteed | Possible | Rejected | No candidate |
|---|
The view is cumulative: moving right adds RNA whose saved upper Hamming bound is within the selected threshold.
Guaranteed contributes signal; Possible and diagnostic statuses never create a band.
| Sample | After cutoff | With IUPAC | BLAST candidates | Guaranteed | Possible | Rejected | No candidate | Short RNA | Guaranteed CPM |
|---|
The length axis is frozen from the union of guaranteed RNA at threshold 6 and does not move with the slider.
No guaranteed bands at this threshold.
| Sample | Length (nt) | RNA | Raw count | Signal CPM | Trace band |
|---|
No RNA is guaranteed at this threshold.
| Sample | Status | RNA | Length (nt) | Raw count | CPM | IUPAC | Hamming bounds | Evidence |
|---|
These records satisfy lower ≤ d < upper. They are diagnostic only and never contribute a band or guaranteed CPM.
No ambiguous RNA is possible at this threshold.
| Sample | Status | RNA | Length (nt) | Raw count | CPM | IUPAC | Hamming bounds | Evidence |
|---|
These records do not contribute signal at the active threshold. BLAST nomination and final Hamming classification are shown as separate stages.
No rejected, no-candidate, or short-RNA records at this threshold.
| Sample | Status | RNA | Length (nt) | Raw count | CPM | IUPAC | Hamming bounds | Evidence |
|---|
lower..upper expresses uncertainty in the RNA sequence, not a range of slider settings.